The 20 Best Naruto Crossover Fanfiction Stories (2024 Edition)

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Look no further if you are looking for some great Naruto crossover fanfiction. 

Naruto is one of the most famous Japanese manga of all time. The series has 72 volumes and has kept readers returning for over fifteen years.

If you like to read popular manga and watch Anime with a great storyline, then Naruto might be just the thing for you.

Along with the Japanese books and the anime TV series, there is a whole world of Naruto fanfiction. 

There are countless stories with different twists and funny crossovers with other fandoms. 

But in this post, I will write about some of the most popular Naruto crossover fanfiction according to hits received in Archive Of Our Own alongside epic merch like this.

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Keep reading to find out more about some of these popular crossover stories. 

1. Padfoot and Hound

This one is an interesting Naruto crossover with Harry Potter.

The difference between this fanfic and the others mentioned so far is that the main character in this story is Sirius Black.

A young Kakashi somehow ended up in England in 1993.

And here, Kakashi meets Sirius in his dog form.

We also see some other characters from Harry Potter and Naruto.

But these two are the most important and are the story’s center.

2. Road to Nowhere

This story is a massive crossover featuring several different fandoms.

The writer also used many other fanfics about various subjects as inspiration.

The characters from Naruto are still the story’s main focus, but so many extra elements are added that give it many layers.

There are funny elements in the story, but also some serious subjects.

This makes the story perfect for almost every fan of Naruto.

The story is built up of 13 chapters in total.

3. Monsters are Made (not born)

This fanfic shows a crossover between Naruto and Attack on Titan.

Eren Yeager is the story’s main focus, and Naruto and Sakura also play a big part.

In this story, we also see some form of reincarnation.

Eren Yeager seems to have come back to life in the world of Naruto.

There are 40 chapters in total, split up into three parts.

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4. Whirlpool Queen, Maelstrom King

This story is a crossover between Naruto and Game of Thrones

Naruto and Sansa Stark are the main characters in this crossover.

The original aspect of this story is that Sansa is actually in the world of Naruto and not the other way around.

The writer made Sansa feel like she belongs in this world.

She is a solid ally for Naruto and someone he can rely on.

Some of the other characters from Game of Thrones also make an appearance.

But they have a much smaller part in the story than Sansa.

The comments state this is one of the best Game of Thrones and Naruto crossovers.

So be sure to take a look and judge for yourself.

5. Falling Leaves of Evergreen Trees

This story is among the most popular Harry Potter and Naruto Crossover fanfics.

The story is incredibly original.

It isn’t just a crossover and Harry Potter reincarnated into the Naruto universe.

Harry Potter does not have any magic in this universe.

But he does have memories of his previous life as the boy who lived.

The writer added many images to the chapter, making it feel even more real.

6. Of Crows and Heroes

In this story, Uchiha Itachi gets reincarnated into the world of Heroes and Villains.

In Naruto, he is a murderer, but in this game, he seems to be a hero.

This is another remarkably original take on two different worlds, put together in a significant way.

It is a very long story, with 122 chapters in total.

And it does end with a small sort of cliffhanger.

And even though it seems like there won’t be any more updates to the story, people are still coming back to it.

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7. Breathe (Don’t Falter)

This story is also a crossover between Naruto and Harry Potter.

The writer made a note explaining that this story is a re-write of a story they wrote.

But in this story, Harry Potter is Jasmine Potter.

There is less and less Harry Potter universe content as the story progresses.

And we see more and more of Naruto come into the story.

8. Can Your Friends Do This?

Here, we have another crossover between Naruto and Harry Potter.

In this case, Harry, or Hari, is a female.

She is put inside a bottle with a spell and then thrown into the Veil.

Only to resurface in the world of Naruto.

Luna also plays a significant role in this story but is not the main character.

The writer stated that they haven’t read any of the Harry Potter books, nor have they seen much of Naruto.

But that doesn’t seem to show when you read this story.

They did some fantastic research and were able to write an intriguing plotline.

9. Karmic Balance

The story is part of a crossover with the manga series “Reborn.”

The main characters are from the Naruto world, mainly Kakashi and Obito.

It reads as a bit of a futuristic version of the Naruto characters.

It is a fast-paced story that will amaze you with every new chapter.

The story contains 14 chapters and is part 1 in the Karma and the Repercussions series.

So, if you liked this story, be sure to go and check out the rest.

10. Sneaking Around Konoha

Here’s another Harry Potter and Naruto crossover, but this time, we focus on the Boy Who Lived and the Copy Ninja.

Harry had always steered clear of loneliness, determined not to let it cast its shadow over his life. 

Then came Kakashi, a surprising antidote to his solitary existence.

A wholesome read about Kakashi and Harry’s bond, reshaping the world of magic and ninjas.

Not only can Kakashi be a comforting presence, but also literally — all possible with this adorable blanket!

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11. Snow Leopard, Not Lion

This story shows another crossover between Naruto and Katekyou Hitman Reborn!

Tobirama is the main character in this story.

This is another reincarnation story or, in this case, a reborn one.

Tobirama wakes up inside the body of a child and that is where the mafia finds him.

The writer also included a cat, Michiko, in the story.

This gives a double meaning to the title and is a charming addition to the story.

This story has 41 chapters and is the first part of a series called the SLnL Verse.

So be sure to check out the rest of the series if you liked this one.

12. Ambrosius

In this Naruto crossover fanfiction, we follow Harry Potter, who finds himself in the shoes of Shikamaru’s younger sister

He would not sit back and let the messed-up system slide

Young soldiers? There was no way he was letting that nonsense pass.

It was time to shake things up. 

The Wizarding World needed a reality check, and he was just the person for the job. 

No more ignoring the insanity of it all.

Harry Potter, or whoever he was now, was about to throw a wrench into the gears of a broken system. 

Brace yourselves because change was coming, and it wouldn’t be gentle.

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13. Bubble Therapy

Harriet Potter gets thrust into a realm where folks wield bizarre powers, and no one utters a word she understands. 

It’s a chaotic situation, and she’s sure she’s in deep trouble. 

But lo and behold, she stumbles upon a surrogate family led by the formidable ruler of a modest yet thriving nation, accompanied by his two offspring. 

When their tranquility faces a looming threat, Harriet steps up to the plate, willingly entering into an arranged matrimony with the chief of the notorious Nara clan in Konoha.

It’s a tale of resilience, unexpected unions, and the relentless pursuit of harmony in a world where the language of power reigns supreme.

14. Deer Tracks

In the next Naruto crossover fanfiction, we follow Harriet Potter, who finds herself at the crossroads of a dire situation in England, a predicament demanding more than just escape.

It demands vanishing from the very fabric of this world. 

An unlikely ally emerges with a solution, one in the form of 

Nara Shikaku.

But the burning question lingers: is she truly prepared for the profound consequences of this remedy? 

15. A Cook’s Resolve

One Piece and Naruto fans will have a field day with this one.

As Sanji cuts through the thicket of towering trees, searching for an exit from the mysterious island, he finds himself in the Land of Fireunimpressed and irked by the sorry state of affairs.

Fueled by an unwavering resolve, Sanji decided to pivot from the chaos. 

Tired of the relentless violence, he opted for a different path — culinary salvation

A restless spirit drove him to open a restaurant to satiate hunger and feed the masses indiscriminately, casting a net of nourishment over all who crossed his threshold.

However, simplicity and the notorious life of a pirate rarely coexist. 

As Sanji embarked on his new venture, the tranquil facade of the Land of Fire masked the brewing storm. 

His restaurant became a magnet for both allies and adversaries

As the aroma of his culinary creations wafted through the air, it became evident that Trouble had a knack for finding even the most renowned pirates.

16. Curses of Interest

Laurel Potter screwed up big time, meddling with something she should’ve left alone. 

A chaotic twist catapulted her into an alternate reality, dumping her in the middle of Naruto Uzumaki’s world, the future Hokage.

Now, caught up in the intricate web of mystical runes keeping her trapped, she’s juggling deciphering the arcane code, whipping Naruto into shape, dodging the relentless ANBU sniffing around, and hunting down every hidden saboteur aiming for her newfound protégé.

It’s a wild ride of unraveling mysteries, intense training sessions, and playing cat-and-mouse with shadowy forces. 

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17. Not Troublesome at All

As the Mirror of Erised shatters into a thousand shards, Nara Shikamaru stumbles upon a child with the most captivating green eyes

They hold a mysterious allure, challenging his usual indifference.

It’s not a spark that ignites immediately but a slow burn of intrigue that begins to stir within him.

As he navigates the complexities of this unexpected encounter, the lazy ninja is forced to confront a troublesome reality beyond the fractured mirror’s enchantment.

18. A True King

Ling Yao’s plummet on the Promised Day didn’t mark the end.

Instead, it thrust him into an unexpected rebirth. Awakening in a realm far removed from Xing, he found himself the heir to none other than the prestigious Hyuuga Clan in Konohagakure

Ling, burdened by the taste of ashes and the ghosts of his past failures, seized this second chance with a resolve to reshape his destiny.

Disgusted by the lackluster state of Konoha’s political landscape, Ling, now an integral Hyuuga, wasted no time initiating a radical overhaul

The once-shattered prince set out to dismantle the outdated clan system, amass a formidable coalition of allies, and spearhead a movement to shatter the oppressive birdcage seal that had bound the village for far too long.

19. Breathe (you’re not alone)

As Yue Naoki delved into the labyrinth of his thoughts, memories stirred, clawing their way to the surface.

Like shards of a broken mirror, fragments of the past reflected incoherent glimpses. 

Amidst the chaos, a name emerged — Tanjirou. 

Yue Naoki, now bound to a different destiny, stood at the threshold of change. 

Memories, once locked away, held the key to a profound metamorphosis. 

The narrative of Naoki’s existence was about to be rewritten, and the world around him would witness the seismic impact of this unexpected reincarnation.


In this final Naruto crossover fanfiction, Uchiha Itachi enters the academy grounds to find his younger brother, Sasuke, causing trouble by verbally attacking a group of fangirls. 

The atmosphere becomes tense as Itachi realizes that Sasuke’s behavior is reminiscent of someone else — Kujo Jotaro. 

The unexpected twist unfolds as Jotaro dies and reincarnates as Uchiha Sasuke, blending the worlds of Naruto and JoJo’s Bizarre Adventure. 

The story promises a unique fusion of characters and adventures as Sasuke navigates his new life with Jotaro’s influence.

Although we can’t be Sasuke like Jotaro here, you can bring him closer to you with this epic shirt.

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Naruto Crossover Fanfiction: Conclusion

I hope this article has helped you find some great Naruto Crossover fanfiction to read!

These are just a tiny sample of all the fantastic stories out there.

So be sure to take a look and find your favorite among them.

And if you have questions about this topic, feel free to leave a message in the comments below!

Lastly, if you want to read more about fanfiction on this blog, then check out:

You can’t talk about Naruto without mentioning the iconic fish cakes, and what better way to end this blog than getting your own through this adorable earrings.

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Naruto Crossover Fanart Extras

Here are some of the extra Naruto crossover fanfiction fan art we’ve made over the years.

Hitman Reborn and Naruto Fanart
Naruto Fanart
Naruto and Friends Fanart
Sansa Stark Fanart

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Which Harry Potter book is JK Rowling's favorite? Click the image above to see if your guess is right!

3 Responses

    1. Hi J,

      Thanks for sharing your opinion! Do you think this story isn’t worthy of being on this list? Do you have a different story you think should be included? Let us know!

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